Use Foldseek Structural Clustering
Official Neurosnap webserver for accessing Foldseek Structural Clustering online.
Overview
The Foldseek easy-cluster algorthim clusters protein structures using a combination of structural and sequence characteristics and allows near full control on search parameters.
Neurosnap Overview
The Foldseek Structural Clustering online webserver allows anybody with a Neurosnap account to run and access Foldseek Structural Clustering, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong Terms of Use and Privacy Policy.
Features
- Structural clustering of PDBs or mmCIFs by creating a structural alignment.
- Includes advanced filters and thresholds to tailor the clustering to your experimental design.
- Provides a collection exportable charts of cluster anchors, cluster members, and overall cluster groups.
Statistics
Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.
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API Request
Access Foldseek Structural Clustering using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.
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Job Note
Provide a name or description for your job to help you organize and track its results. This input is solely for organizational purposes and does not impact the outcome of the job.
Inputs & Configuration
Ready to submit your job?
Review your configuration, then confirm the estimated credit cost before you run the job.
Note that credit estimates are not guaranteed and runtime can vary depending on inputs and settings.
Estimated Credits: calculating...
To submit a job please login or register an account.